Bovine parvovirus-1 strain Abinanti, complete genome
GenBank: DQ335247.1
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LOCUS       DQ335247                5515 bp    DNA     linear   VRL 16-OCT-2007
DEFINITION  Bovine parvovirus-1 strain Abinanti, complete genome.
ACCESSION   DQ335247
VERSION     DQ335247.1
KEYWORDS    .
SOURCE      Bovine parvovirus 1
  ORGANISM  Bovine parvovirus 1
            Viruses; Monodnaviria; Shotokuvirae; Cossaviricota;
            Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae;
            Bocaparvovirus.
REFERENCE   1  (bases 1 to 5515)
  AUTHORS   Qiu,J., Cheng,F., Johnson,F.B. and Pintel,D.
  TITLE     The transcription profile of the bocavirus bovine parvovirus is
            unlike those of previously characterized parvoviruses
  JOURNAL   J. Virol. 81 (21), 12080-12085 (2007)
   PUBMED   17715221
REFERENCE   2  (bases 1 to 5515)
  AUTHORS   Qiu,J., Pintel,D. and Johnson,F.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2005) Dept. of Molecular Microbiology and
            Immunology, University of Missouri-Columbia, 1201 Rollins Street,
            Columbia, MO 65211, USA
FEATURES             Location/Qualifiers
     source          1..5515
                     /organism="Bovine parvovirus 1"
                     /mol_type="genomic DNA"
                     /strain="Abinanti"
                     /db_xref="taxon:2839036"
     CDS             336..2918
                     /note="nonstructural protein 1"
                     /codon_start=1
                     /product="NS-1"
                     /protein_id="ABC69727.1"
                     /translation="MATGGLAKWVGAVQAFGHPSWSYVIKLRHGHVTMIERGFYELCG
                     GENWNMLHELPGDNGLLEMWESRESMLESWSPGDGHSWAMAWAGWRAARETMQRRQYV
                     NEPTFSCWSQSELGENGWHVHIIIGGPGLTRQNAAISRSILCTSFFKHLLITIRQRTH
                     APYTVLSRDELNAWNWLQKIAQRVMRGDMDDIVDILKCRKANGTLVAQAINGTEFITR
                     YMLPKNRKVANTVLTRHTTPEQSYDSTWGKTYGFAVCNGETVSEFTRKDLWKVLYNIY
                     TAHPAENMLNSNPSVWGDLPRVSANRIDADDAEARSRPIKLSRKQKIMAEVIQRATDG
                     LLLTYNDLVVHLSDLMLMLEGMPGGSKTAEQLLTMIHIKLCAKYNAYEFMLMKTPATQ
                     NMNPGAPHYDCQGNLVFKLLNLQGYNPWQVGHWLVMMLSKKTGKRNSTLFYGPASTGK
                     TNLAKAICHAVGLYGCVNHNNKQFPFNDAPNKMILWWEECIMTTDYVEAAKCVLGGTH
                     VRVDVKHKDSRELPQIPVLLSSNHDVYTVVGGNATFGVHAAPLKERITQMNFMKQLPN
                     TFGEITPGMISNWLSHCAHIHQEHLSLEGFAIKWDVQSVGNSFPLQTLCPGHSQNWTF
                     SENGVCWHCGGFIQPTPESDTDSDGDPDPDGAVAGDSDTSANSESTVSFSSNDSGLGS
                     VTSSAPSVPDRAEEIEEIPSECLEWMREEVDRLSAHDINSLAHQATGFILDPIPEEPE
                     ERERDLAREDAEPEASTSHTPATKRARVEEGEPWDGTQPITEGDWIDFESRQKRRRLE
                     REEKGGEDEDMEVQESDPSAWGEKLGIVEKPGEEPIVLYCFETLPESDEEGDSDKENK
                     THTV"
     CDS             1185..2918
                     /note="nonstructural protein 2"
                     /codon_start=1
                     /product="NS-2"
                     /protein_id="ABC69730.1"
                     /translation="MLNSNPSVWGDLPRVSANRIDADDAEARSRPIKLSRKQKIMAEV
                     IQRATDGLLLTYNDLVVHLSDLMLMLEGMPGGSKTAEQLLTMIHIKLCAKYNAYEFML
                     MKTPATQNMNPGAPHYDCQGNLVFKLLNLQGYNPWQVGHWLVMMLSKKTGKRNSTLFY
                     GPASTGKTNLAKAICHAVGLYGCVNHNNKQFPFNDAPNKMILWWEECIMTTDYVEAAK
                     CVLGGTHVRVDVKHKDSRELPQIPVLLSSNHDVYTVVGGNATFGVHAAPLKERITQMN
                     FMKQLPNTFGEITPGMISNWLSHCAHIHQEHLSLEGFAIKWDVQSVGNSFPLQTLCPG
                     HSQNWTFSENGVCWHCGGFIQPTPESDTDSDGDPDPDGAVAGDSDTSANSESTVSFSS
                     NDSGLGSVTSSAPSVPDRAEEIEEIPSECLEWMREEVDRLSAHDINSLAHQATGFILD
                     PIPEEPEERERDLAREDAEPEASTSHTPATKRARVEEGEPWDGTQPITEGDWIDFESR
                     QKRRRLEREEKGGEDEDMEVQESDPSAWGEKLGIVEKPGEEPIVLYCFETLPESDEEG
                     DSDKENKTHTV"
     CDS             2659..3300
                     /note="nonstructural protein"
                     /codon_start=1
                     /product="NP"
                     /protein_id="ABC69728.1"
                     /translation="MERSRSPRETGSTSSRDKSDADWSERRREERTRTWKSRSPIRAH
                     GERSWGSWRSREKNQSSSTASRPYQKATRKETATKKTKHTPFNVFSAHRALSKTDLQF
                     CGFYWHSTRLASKGTNEIFNGLKQSFQSKAIDGKLDWEGVGELLFEQKKCLDTWYRNM
                     MYHFALGGDCEKCNYWDDVYKKHLANVDTYSVAEEITDSEMLEAAEAVDAANQ"
     CDS             3284..5305
                     /note="capsid protein"
                     /codon_start=1
                     /product="VP1"
                     /protein_id="ABC69729.1"
                     /translation="MPPTNKANSKKGLTLPGYNYLGPFNSLFAGAPVNKADAAARKHD
                     FGYSDLLKEGKNPYLYFNTHDQNLIDELKDDTSFGGKLARGVFQIKKALAPALPGTSK
                     GGDKALKRKLYFARSNKGAKKANREPAPSTSNQQNMEVSNDIPNDEAGNQPIELATRS
                     VGGSGSVGGGGRGGSGVGYSTGGWTGGTIFSENIVVTKNTRQFICDIKNGHLYKSEVL
                     NTGDTAHRQYAITTPWSYFNFNQYSSHFSPNDWQHLVNDYERFRPKAMIVRVYNLQIK
                     QIMTDGAMGTVYNNDLTAGMHIFCDGDHRYPYVQHPWDDQCMPELPNSIWELPQYAYI
                     PAPISVVDNNTTNTVEEHLLKGVPLYMLENSDHEVLRTGESTEFTFNFGDCEWIENNI
                     TFSMPQMMYNPLVRSRRIYSYSGPNNQTSNAFQNAALRTSNWMSGPGIARGTHNATLQ
                     TQSAGALVTMVTNGADVSGVGAVRVGYSTDPIYGGQQPDSDLLRLRYSASAAEGQQNP
                     ILENAARHTFTREARTKLITGSNGADGNYKEWWMLPNQMWDSAPISRYNPIWVKVPRV
                     NRKTLLDTQDGSIPMSHPPGTIFIKLARIPVPGNGDSFLNIYVTGQVSCEVVWEVEKR
                     GTKNWRPEYMHSATNMSVDAYTINNAGVYAGAVQNADVMQTRFNHHKVL"
     CDS             3695..5305
                     /note="capsid protein"
                     /codon_start=1
                     /product="VP2"
                     /protein_id="ABC69731.1"
                     /translation="MEVSNDIPNDEAGNQPIELATRSVGGSGSVGGGGRGGSGVGYST
                     GGWTGGTIFSENIVVTKNTRQFICDIKNGHLYKSEVLNTGDTAHRQYAITTPWSYFNF
                     NQYSSHFSPNDWQHLVNDYERFRPKAMIVRVYNLQIKQIMTDGAMGTVYNNDLTAGMH
                     IFCDGDHRYPYVQHPWDDQCMPELPNSIWELPQYAYIPAPISVVDNNTTNTVEEHLLK
                     GVPLYMLENSDHEVLRTGESTEFTFNFGDCEWIENNITFSMPQMMYNPLVRSRRIYSY
                     SGPNNQTSNAFQNAALRTSNWMSGPGIARGTHNATLQTQSAGALVTMVTNGADVSGVG
                     AVRVGYSTDPIYGGQQPDSDLLRLRYSASAAEGQQNPILENAARHTFTREARTKLITG
                     SNGADGNYKEWWMLPNQMWDSAPISRYNPIWVKVPRVNRKTLLDTQDGSIPMSHPPGT
                     IFIKLARIPVPGNGDSFLNIYVTGQVSCEVVWEVEKRGTKNWRPEYMHSATNMSVDAY
                     TINNAGVYAGAVQNADVMQTRFNHHKVL"
ORIGIN      
        1 atatttttat tactcatctc ctgcatccac catattggct gcccgggcca ataatgcgag
       61 cggctgcgcc gctgcgcgct tcgcgcgcgc attgtaaggc ctaatcgggc agccaatatg
      121 gtggatgcag gagatgagta ataaaaatat agagcctgtg attaagcgag acgtcataga
      181 cgaggacagg tggaccaatc acattaaagg tcaagctaat gattaaccag ggggtggaga
      241 ctagagggta tataaagaga aaaccaggaa gtcaaaaatc agactgctgc agacctcgac
      301 agagaacaca cgtctctgcg ctctggtgag tgaagatggc tactgggggg ctagctaaat
      361 gggtgggagc tgtgcaggcc tttgggcatc catcttggtc ctacgtcatc aagctgcgtc
      421 atggtcacgt gaccatgatt gagagaggct tctatgaact gtgtggggga gagaattgga
      481 atatgctcca cgaactacct ggagacaatg gactgttaga gatgtgggag agcagagaaa
      541 gcatgctaga gagttggagt ccaggagatg gacacagttg ggccatggca tgggcagggt
      601 ggagagctgc tagagagacc atgcagagaa gacagtatgt caacgagccg acatttagtt
      661 gctggagcca gagcgagctg ggggagaacg gatggcatgt gcatataatt attgggggtc
      721 cgggactgac cagacaaaat gcagccatct cgaggtctat actctgcact tcattcttta
      781 aacaccttct gatcactatt agacagagaa cacacgctcc atacactgtg ctatctagag
      841 atgagctgaa tgcatggaac tggctacaaa agatagctca gagagtgatg aggggagaca
      901 tggatgacat tgtagacatc ctgaagtgca gaaaggccaa cggcacgctg gtagctcagg
      961 cgatcaacgg cacagaattc atcactagat atatgctacc taaaaataga aaggtggcta
     1021 acacagtctt aacgagacac actacaccag aacagagcta cgactctact tggggtaaaa
     1081 catatggctt cgcggtctgt aacggcgaga cggtctccga gttcacaagg aaagatctct
     1141 ggaaagtcct ttacaacatc tacacagcgc atccagctga gaacatgctc aactcaaacc
     1201 caagcgtgtg gggagacctt ccaagggtaa gcgctaaccg catcgacgcg gacgacgcgg
     1261 aggccagatc aaggccgatt aaattatcca gaaaacaaaa aatcatggct gaagtgattc
     1321 agcgagccac tgatgggtta ctgttaacct acaatgattt ggtagtacat ttgtctgatt
     1381 tgatgttaat gcttgagggc atgccgggcg gaagtaaaac tgctgaacag ctgcttacca
     1441 tgattcacat taaattgtgt gccaaataca atgcttatga atttatgctg atgaaaactc
     1501 ctgctactca aaacatgaat ccgggagcac cacactatga ctgccaggga aacttggtct
     1561 ttaagctgct caacttacaa ggatacaatc cttggcaagt ggggcactgg ttagtcatga
     1621 tgctttctaa aaaaacgggg aaaagaaatt ctactctttt ctatgggcca gcgagcacgg
     1681 ggaaaaccaa tctcgctaag gccatctgcc acgcagtggg gctatacggg tgcgtgaacc
     1741 acaacaacaa acagtttcct tttaacgatg cacccaacaa aatgatcctg tggtgggagg
     1801 aatgcatcat gactacagac tacgtagagg cagcaaagtg tgtgctcggg ggaactcacg
     1861 tcagggtaga cgtgaaacac aaagattcta gggagctgcc tcagattcca gtgcttcttt
     1921 cgagcaacca cgacgtatat accgtcgtgg ggggaaacgc cacgtttgga gttcacgcgg
     1981 caccgctcaa agaaagaatc actcagatga attttatgaa gcagctccct aacacttttg
     2041 gagaaatcac tccgggcatg atttcaaatt ggctgtctca ctgcgcgcac attcaccaag
     2101 aacatctgtc gctggaaggc tttgctatta aatgggacgt gcagagcgtg ggaaacagct
     2161 ttcctttaca gactctctgt cctggccatt cacagaactg gacattcagc gaaaacggcg
     2221 tctgctggca ctgcggaggt ttcatccagc caacaccaga atcagacact gactctgacg
     2281 gagatcctga ccctgacggt gctgttgctg gcgatagcga tacttctgct aacagtgagt
     2341 ctacagtatc gtttagcagt aacgactcag gactaggatc cgtcacttca tcagctccat
     2401 cggtacctga cagagccgag gaaatagagg agattcccag tgagtgcttg gagtggatgc
     2461 gggaggaggt tgatagactg agcgctcacg acatcaactc actcgctcac caagctactg
     2521 ggttcatcct agatcccatt ccagaagaac cagaagaaag ggagcgggat ctggctagag
     2581 aggacgccga gccagaagca tcgacgagtc acactccagc taccaaaaga gctcgcgtgg
     2641 aggaaggtga gccgtgggat ggaacgcagc cgatcaccga gggagactgg atcgacttcg
     2701 agtcgagaca aaagcgacgc agactggagc gagaggagaa gggaggagag gacgaggaca
     2761 tggaagtcca ggagtccgat ccgagcgcat ggggagagaa gctggggatc gtggagaagc
     2821 cgggagaaga accaatcgtc ctctactgct tcgagacctt accagaaagc gacgaggaag
     2881 gagacagcga caaagaaaac aaaacacaca ccgtttaacg tgtttagcgc tcaccgagca
     2941 ctctccaaaa cagatctcca gttctgcggc ttctactggc actcaactcg actagccagc
     3001 aaaggaacta atgaaatatt caatggacta aaacaatcat ttcaatcaaa agcgattgac
     3061 gggaaacttg attgggaagg ggtgggagaa ttgttatttg agcaaaaaaa atgtttagac
     3121 acttggtata gaaacatgat gtatcacttt gccttggggg gtgattgtga aaaatgtaat
     3181 tactgggatg atgtgtacaa aaaacacttg gctaatgtag acacttattc tgttgcagaa
     3241 gagataactg attctgaaat gctggaagcg gcagaagctg ttgatgccgc caaccaataa
     3301 agctaattca aaaaaaggcc tgacattacc tggctacaat tatttgggtc cattcaattc
     3361 tttattcgcg ggcgcgccag tgaataaagc agacgcggca gcgcgaaaac acgactttgg
     3421 ctattctgac ttgttaaagg agggaaagaa tccctaccta tactttaaca cacacgacca
     3481 aaacctcata gacgaactca aagacgacac ttcctttggc gggaaactcg caagaggagt
     3541 gtttcaaata aaaaaagcac tggcgccagc tctgccaggc acatccaaag gaggagacaa
     3601 agccttaaaa agaaagctat actttgcgcg ctcaaacaag ggcgccaaaa aagcaaacag
     3661 agaacctgca ccaagcacat ccaatcaaca gaacatggag gtatcaaatg atatacctaa
     3721 cgacgaggct ggcaatcagc caattgaact ggcgactcgg tccgtggggg gatcgggttc
     3781 ggtgggtggc ggcggccgag ggggctctgg agtgggctac tcaactggcg gatggacggg
     3841 gggcaccata tttagcgaga acattgtggt cactaaaaac actcgccagt ttatatgtga
     3901 catcaaaaac ggccatctct ataaaagcga ggtgcttaac actggtgaca cggctcacag
     3961 gcaatatgcc attaccactc cgtggagcta ttttaatttc aaccagtaca gctctcactt
     4021 tagtcctaat gactggcaac acctggtcaa cgactacgag agattcagac caaaagccat
     4081 gatagtgaga gtatacaacc tgcagataaa acagatcatg acagacggag ccatggggac
     4141 cgtctacaac aatgatctga ctgcaggcat gcacatcttc tgcgacgggg atcacagata
     4201 cccatacgta cagcatccat gggatgacca atgcatgcca gagctgccaa acagcatatg
     4261 ggagctacca caatatgctt acataccagc tccaatatca gtcgtagaca acaacactac
     4321 aaacacagta gaagaacacc tactgaaagg agtacctcta tacatgctgg aaaactctga
     4381 ccacgaagtg ctacgcacgg gagaatctac agaatttaca ttcaactttg gagactgcga
     4441 atggatagaa aacaacatca cattcagcat gcctcagatg atgtacaatc cactggtcag
     4501 aagcagaaga atctactcat acagcggacc aaacaaccaa acaagcaacg cattccagaa
     4561 tgcagcactg agaaccagca actggatgtc aggaccagga atcgcaaggg gaacacacaa
     4621 cgcaactctg caaacacaat ctgcaggggc actggtgacc atggtaacta acggagcaga
     4681 cgtctccggg gtgggagccg tgcgagtagg atactcgacg gatccaatct acgggggaca
     4741 gcaaccagat tcagacctgc tgagactgag atactccgca tcggcagcag aaggacaaca
     4801 aaacccaata ttggaaaacg cagcaagaca cacttttacc agagaggcga gaacgaaact
     4861 gatcacggga tccaacggag cagacggaaa ctacaaagaa tggtggatgc taccaaacca
     4921 gatgtgggac tcggcgccta tctcgagata caatccaata tgggtcaagg taccgagagt
     4981 caacagaaag acactcctgg acacgcaaga cggatccatt ccaatgtcac atccgccagg
     5041 aaccatcttc atcaagctag caagaattcc agtaccagga aacggagact cgttcctcaa
     5101 catctacgtc accggacaag tctcatgcga agtcgtctgg gaggtagaaa agaggggcac
     5161 caaaaattgg agaccggaat acatgcactc agcaacaaac atgtccgtcg atgcatacac
     5221 catcaacaac gccggcgtct acgcaggcgc ggtacaaaac gcagacgtca tgcagacaag
     5281 attcaatcac cacaaagtcc tgtagggggc gcaagaaaaa agacactcta tacacccgct
     5341 ttatatattt ttacactgat tcactctttc cgccatcttt tagttgtatt cttagttatc
     5401 aataaaggcg cggagcgcca taaaaaatta tgtcatatgg cgcttcgcgc ctttattgat
     5461 aactaagaat acaactaaaa gatggcggaa agagtgaatc cgtgtaaaaa tattt
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